DYNC1LI1      CRISPR in HepG2      Batch: BGHcLV50

Experiment Information (Status: Sequenced)
BGHcLV50-31BGHcLV50-32
idx00
TRCN#_or_BGC#BGC#0001411BGC#0001411
shRNA_or_gRNA_sequenceACGCTATCTCGTTGCCCAAGACGCTATCTCGTTGCCCAAG
PAMGGGGGG
NameDYNC1LI1_95DYNC1LI1_95
Sample_IDBGHcLV50-31BGHcLV50-32
transduction_Date7/29/257/29/25
daysD6D6
RBP_nameDYNC1LI1DYNC1LI1
qPCR_result
Ave_qPCR
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc29663377
WB_result77.478.5
Ave_WB
WB_DONE_date8/14/25
MW57KD
IP
antibody_Cat#A304-208Alot# 1
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM00
Rep2_TPM00
ActionReadyReady
Library_start_date
repeat_library
Note
ID1003310034




Western Blot
Western Blot info was not avaliable




Experiment Status
BGHcLV50-31BGHcLV50-32
Sample_IDBGHcLV50-31BGHcLV50-32
Sample Name
Sample NameDYNC1LI1-BGHcLV50-31DYNC1LI1-BGHcLV50-32
RBPDYNC1LI1DYNC1LI1
Cell_LineHepG2HepG2
Exp UID
StatusSequencedSequenced
Status_date2025-10-302025-10-30
ProjectENCORE2ENCORE2
Note
ID1445414455




Library-Prep Information
BGHcLV50-31BGHcLV50-32
Sample #78
Sample NameDYNC1LI1-BGHcLV50-31DYNC1LI1-BGHcLV50-32
Sample_Name_Alias
Index Well PositionG10H10
Index_tableIDT_UniqueDualIndex_96_V2IDT_UniqueDualIndex_96_V2
LibPrep_date2025-10-012025-10-01
Lib_IDLib-251001Lib-251001
Tecan_Location
Tecan
Tecan_date
Size_bp280269
Peak_Molarity32.3035.60
libSampleQC_DNA_Well
RIN
libSample_RNA_Well
SampleQC_methodTapeStation_2022TapeStation_2022
SampleQC_date2025-10-032025-10-03
Sample_IDBGHcLV50-31BGHcLV50-32
RBPDYNC1LI1DYNC1LI1
Batch_IDBGHcLV50BGHcLV50
WB_result77.40078.500
Library DescriptionTruSeq mRNATruSeq mRNA
Repeat_Library_Suffix
Lib_StatusSendToSequenceSendToSequence
ProjectENCORE2ENCORE2
ID48224823




Sequencing Information
BGHcLV50-31BGHcLV50-32
Sample_IDBGHcLV50-31BGHcLV50-32
Sample NameDYNC1LI1-BGHcLV50-31DYNC1LI1-BGHcLV50-32
Pool IDPool-251003Pool-251003
LocalServer_folder
total_reads00
total_aligned_reads00
unique_aligned_reads00
percent_uniqueAligned
correlation_replicates
spikein_reads00
percent_spikeins
original_ReadLength
QC_StatusReadyToQCReadyToQC
ID34773478




Data Submission Information
DCC submission information was not avaliable




File Information
Files of the experiment was not avaliable in the database