non-target      CRISPR in HepG2      Batch: BGHcLV50

General Information

List KD experiments controlled by BGHcLV50-1 and BGHcLV50-2


NT-BGHcLV50-1,NT-BGHcLV50-2:No KD experiments controlled by NT-BGHcLV50-1 and NT-BGHcLV50-2 are available on the database




Experiment Information (Status: Sequenced)
BGHcLV50-1BGHcLV50-2
idx00
TRCN#_or_BGC#
shRNA_or_gRNA_sequence
PAM
Namenon-targetnon-target
Sample_IDBGHcLV50-1BGHcLV50-2
transduction_Date7/29/257/29/25
daysD6D6
RBP_namenon-targetnon-target
qPCR_result
Ave_qPCR
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc03005
WB_result
Ave_WB
WB_DONE_date
MW
IP
antibody_Cat#
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM00
Rep2_TPM00
ActionReadyReady
Library_start_date
repeat_library
Note
ID1000110002




Western Blot
Western Blot info was not avaliable




Experiment Status
BGHcLV50-1BGHcLV50-2
Sample_IDBGHcLV50-1BGHcLV50-2
Sample Name
Sample NameNT-BGHcLV50-1NT-BGHcLV50-2
RBPnon-targetnon-target
Cell_LineHepG2HepG2
Exp UID
StatusSequencedSequenced
Status_date2025-10-302025-10-30
ProjectENCORE2ENCORE2
Note
ID1444814449




Library-Prep Information
BGHcLV50-1BGHcLV50-2
Sample #12
Sample NameNT-BGHcLV50-1NT-BGHcLV50-2
Sample_Name_Alias
Index Well PositionA10B10
Index_tableIDT_UniqueDualIndex_96_V2IDT_UniqueDualIndex_96_V2
LibPrep_date2025-10-012025-10-01
Lib_IDLib-251001Lib-251001
Tecan_Location
Tecan
Tecan_date
Size_bp283291
Peak_Molarity37.2039.30
libSampleQC_DNA_Well
RIN
libSample_RNA_Well
SampleQC_methodTapeStation_2022TapeStation_2022
SampleQC_date2025-10-032025-10-03
Sample_IDBGHcLV50-1BGHcLV50-2
RBPNTNT
Batch_IDBGHcLV50BGHcLV50
WB_result0.0000.000
Library DescriptionTruSeq mRNATruSeq mRNA
Repeat_Library_Suffix
Lib_StatusSendToSequenceSendToSequence
ProjectENCORE2ENCORE2
ID48164817




Sequencing Information
BGHcLV50-1BGHcLV50-2
Sample_IDBGHcLV50-1BGHcLV50-2
Sample NameNT-BGHcLV50-1NT-BGHcLV50-2
Pool IDPool-251003Pool-251003
LocalServer_folder
total_reads00
total_aligned_reads00
unique_aligned_reads00
percent_uniqueAligned
correlation_replicates
spikein_reads00
percent_spikeins
original_ReadLength
QC_StatusReadyToQCReadyToQC
ID34713472




Data Submission Information
DCC submission information was not avaliable




File Information
Files of the experiment was not avaliable in the database