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COPB1
CRISPR
in HepG2
Batch: BGHcLV47
Experiment Information
Sequencing Information
Data Submission
Files
Experiment Information
Western Blot
Experiment Status
Experiment Information (Status:
Sequenced
)
BGHcLV47-9
BGHcLV47-10
idx
0
0
TRCN#_or_BGC#
BGC#0001228
BGC#0001228
shRNA_or_gRNA_sequence
ATAACCAGAAACCATGACGG
ATAACCAGAAACCATGACGG
PAM
CGG
CGG
Name
COPB1_89U
COPB1_89U
Sample_ID
BGHcLV47-9
BGHcLV47-10
transduction_Date
1/28/25
1/28/25
days
D6
D6
RBP_name
COPB1
COPB1
qPCR_result
Ave_qPCR
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc
1825
2027
WB_result
60.0
59.2
Ave_WB
WB_DONE_date
2/5/25
MW
107kd
IP
Rabbit / I
antibody_Cat#
A304-723A
LOT #1
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM
0
0
Rep2_TPM
0
0
Action
Ready
Ready
Library_start_date
repeat_library
Note
ID
9796
9797
Western Blot
Western Blot info was not avaliable
Experiment Status
BGHcLV47-9
BGHcLV47-10
Sample_ID
BGHcLV47-9
BGHcLV47-10
Sample Name
Sample Name
COPB1-BGHcLV47-9
COPB1-BGHcLV47-10
RBP
COPB1
COPB1
Cell_Line
HepG2
HepG2
Exp UID
Status
Sequenced
Sequenced
Status_date
2025-05-14
2025-05-14
Project
ENCORE2
ENCORE2
Note
ID
14154
14155
Library-Prep
Sequencing
Library-Prep Information
BGHcLV47-9
BGHcLV47-10
Sample #
7
8
Sample Name
COPB1-BGHcLV47-9
COPB1-BGHcLV47-10
Sample_Name_Alias
Index Well Position
G08
H08
Index_table
IDT_UniqueDualIndex_96_V2
IDT_UniqueDualIndex_96_V2
LibPrep_date
2025-04-23
2025-04-23
Lib_ID
Lib-250423
Lib-250423
Tecan_Location
Tecan
Tecan_date
Size_bp
256
268
Peak_Molarity
33.40
45.90
libSampleQC_DNA_Well
RIN
libSample_RNA_Well
SampleQC_method
TapeStation_2022
TapeStation_2022
SampleQC_date
2025-04-22
2025-04-22
Sample_ID
BGHcLV47-9
BGHcLV47-10
RBP
COPB1
COPB1
Batch_ID
BGHcLV47
BGHcLV47
WB_result
60.000
59.200
Library Description
TruSeq mRNA
TruSeq mRNA
Repeat_Library_Suffix
Lib_Status
SendToSequence
SendToSequence
Project
ENCORE2
ENCORE2
ID
4718
4719
Sequencing Information
BGHcLV47-9
BGHcLV47-10
Sample_ID
BGHcLV47-9
BGHcLV47-10
Sample Name
COPB1-BGHcLV47-9
COPB1-BGHcLV47-10
Pool ID
Pool-250422
Pool-250422
LocalServer_folder
total_reads
0
0
total_aligned_reads
0
0
unique_aligned_reads
0
0
percent_uniqueAligned
correlation_replicates
spikein_reads
0
0
percent_spikeins
original_ReadLength
QC_Status
ReadyToQC
ReadyToQC
ID
3421
3422
Data Submission Information
DCC submission information was not avaliable
File Information
Files of the experiment was not avaliable in the database
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