NELFCD      CRISPR in HepG2      Batch: BGHcLV47

Experiment Information (Status: Sequenced)
BGHcLV47-45BGHcLV47-46
idx00
TRCN#_or_BGC#BGC#0001161BGC#0001161
shRNA_or_gRNA_sequenceACTACGGGAGCGCGGCCGAGACTACGGGAGCGCGGCCGAG
PAMTGGTGG
NameNELFCD_92NELFCD_92
Sample_IDBGHcLV47-45BGHcLV47-46
transduction_Date1/28/251/28/25
daysD6D6
RBP_nameNELFCDNELFCD
qPCR_result
Ave_qPCR
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc49794532
WB_result96.296.5
Ave_WB
WB_DONE_date3/24/25,3/11/25
MW66kd
IP
antibody_Cat#12265Slot # 1
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM00
Rep2_TPM00
ActionReadyReady
Library_start_date
repeat_library
Note
ID98329833




Western Blot
Western Blot info was not avaliable




Experiment Status
BGHcLV47-45BGHcLV47-46
Sample_IDBGHcLV47-45BGHcLV47-46
Sample Name
Sample NameNELFCD-BGHcLV47-45NELFCD-BGHcLV47-46
RBPNELFCDNELFCD
Cell_LineHepG2HepG2
Exp UID
StatusSequencedSequenced
Status_date2025-05-142025-05-14
ProjectENCORE2ENCORE2
Note
ID1416614167




Library-Prep Information
BGHcLV47-45BGHcLV47-46
Sample #1920
Sample NameNELFCD-BGHcLV47-45NELFCD-BGHcLV47-46
Sample_Name_Alias
Index Well PositionC10D10
Index_tableIDT_UniqueDualIndex_96_V2IDT_UniqueDualIndex_96_V2
LibPrep_date2025-04-232025-04-23
Lib_IDLib-250423Lib-250423
Tecan_Location
Tecan
Tecan_date
Size_bp269270
Peak_Molarity61.4051.40
libSampleQC_DNA_Well
RIN
libSample_RNA_Well
SampleQC_methodTapeStation_2022TapeStation_2022
SampleQC_date2025-04-222025-04-22
Sample_IDBGHcLV47-45BGHcLV47-46
RBPNELFCDNELFCD
Batch_IDBGHcLV47BGHcLV47
WB_result96.20096.500
Library DescriptionTruSeq mRNATruSeq mRNA
Repeat_Library_Suffix
Lib_StatusSendToSequenceSendToSequence
ProjectENCORE2ENCORE2
ID47304731




Sequencing Information
BGHcLV47-45BGHcLV47-46
Sample_IDBGHcLV47-45BGHcLV47-46
Sample NameNELFCD-BGHcLV47-45NELFCD-BGHcLV47-46
Pool IDPool-250422Pool-250422
LocalServer_folder
total_reads00
total_aligned_reads00
unique_aligned_reads00
percent_uniqueAligned
correlation_replicates
spikein_reads00
percent_spikeins
original_ReadLength
QC_StatusReadyToQCReadyToQC
ID34333434




Data Submission Information
DCC submission information was not avaliable




File Information
Files of the experiment was not avaliable in the database