HSPA9      CRISPR in HepG2      Batch: BGHcLV47

Experiment Information (Status: Sequenced)
BGHcLV47-41BGHcLV47-42
idx00
TRCN#_or_BGC#BGC#0001148BGC#0001148
shRNA_or_gRNA_sequenceTGGGGATACCTTCTTAGGTGTGGGGATACCTTCTTAGGTG
PAMGGGGGG
NameHSPA9_82HSPA9_82
Sample_IDBGHcLV47-41BGHcLV47-42
transduction_Date1/28/251/28/25
daysD6D6
RBP_nameHSPA9HSPA9
qPCR_result
Ave_qPCR
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc30883951
WB_result71.482.9
Ave_WB
WB_DONE_date3/18/25
MW75kd
IP
antibody_Cat#3593Slot # 2
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM00
Rep2_TPM00
ActionReadyReady
Library_start_date
repeat_library
Note
ID98289829




Western Blot
Western Blot info was not avaliable




Experiment Status
BGHcLV47-41BGHcLV47-42
Sample_IDBGHcLV47-41BGHcLV47-42
Sample Name
Sample NameHSPA9-BGHcLV47-41HSPA9-BGHcLV47-42
RBPHSPA9HSPA9
Cell_LineHepG2HepG2
Exp UID
StatusSequencedSequenced
Status_date2025-05-142025-05-14
ProjectENCORE2ENCORE2
Note
ID1416214163




Library-Prep Information
BGHcLV47-41BGHcLV47-42
Sample #1516
Sample NameHSPA9-BGHcLV47-41HSPA9-BGHcLV47-42
Sample_Name_Alias
Index Well PositionG09H09
Index_tableIDT_UniqueDualIndex_96_V2IDT_UniqueDualIndex_96_V2
LibPrep_date2025-04-232025-04-23
Lib_IDLib-250423Lib-250423
Tecan_Location
Tecan
Tecan_date
Size_bp251259
Peak_Molarity38.0042.20
libSampleQC_DNA_Well
RIN
libSample_RNA_Well
SampleQC_methodTapeStation_2022TapeStation_2022
SampleQC_date2025-04-222025-04-22
Sample_IDBGHcLV47-41BGHcLV47-42
RBPHSPA9HSPA9
Batch_IDBGHcLV47BGHcLV47
WB_result71.40082.900
Library DescriptionTruSeq mRNATruSeq mRNA
Repeat_Library_Suffix
Lib_StatusSendToSequenceSendToSequence
ProjectENCORE2ENCORE2
ID47264727




Sequencing Information
BGHcLV47-41BGHcLV47-42
Sample_IDBGHcLV47-41BGHcLV47-42
Sample NameHSPA9-BGHcLV47-41HSPA9-BGHcLV47-42
Pool IDPool-250422Pool-250422
LocalServer_folder
total_reads00
total_aligned_reads00
unique_aligned_reads00
percent_uniqueAligned
correlation_replicates
spikein_reads00
percent_spikeins
original_ReadLength
QC_StatusReadyToQCReadyToQC
ID34293430




Data Submission Information
DCC submission information was not avaliable




File Information
Files of the experiment was not avaliable in the database