DENR      CRISPR in HepG2      Batch: BGHcLV47

Experiment Information (Status: Sequenced)
BGHcLV47-11BGHcLV47-12
idx00
TRCN#_or_BGC#BGC#0001230BGC#0001230
shRNA_or_gRNA_sequenceTGACATTTCTGAATCCAGCGTGACATTTCTGAATCCAGCG
PAMGGGGGG
NameDENR_79DENR_79
Sample_IDBGHcLV47-11BGHcLV47-12
transduction_Date1/28/251/28/25
daysD6D6
RBP_nameDENRDENR
qPCR_result
Ave_qPCR
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc37093623
WB_result63.658.2
Ave_WB
WB_DONE_date2/5/25
MW22KD
IP
antibody_Cat#A303-010Alot # 1
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM00
Rep2_TPM00
ActionReadyReady
Library_start_date
repeat_library
Note
ID97989799




Western Blot
Western Blot info was not avaliable




Experiment Status
BGHcLV47-11BGHcLV47-12
Sample_IDBGHcLV47-11BGHcLV47-12
Sample Name
Sample NameDENR-BGHcLV47-11DENR-BGHcLV47-12
RBPDENRDENR
Cell_LineHepG2HepG2
Exp UID
StatusSequencedSequenced
Status_date2025-05-142025-05-14
ProjectENCORE2ENCORE2
Note
ID1415614157




Library-Prep Information
BGHcLV47-11BGHcLV47-12
Sample #910
Sample NameDENR-BGHcLV47-11DENR-BGHcLV47-12
Sample_Name_Alias
Index Well PositionA09B09
Index_tableIDT_UniqueDualIndex_96_V2IDT_UniqueDualIndex_96_V2
LibPrep_date2025-04-232025-04-23
Lib_IDLib-250423Lib-250423
Tecan_Location
Tecan
Tecan_date
Size_bp267271
Peak_Molarity55.1040.70
libSampleQC_DNA_Well
RIN
libSample_RNA_Well
SampleQC_methodTapeStation_2022TapeStation_2022
SampleQC_date2025-04-222025-04-22
Sample_IDBGHcLV47-11BGHcLV47-12
RBPDENRDENR
Batch_IDBGHcLV47BGHcLV47
WB_result63.60058.200
Library DescriptionTruSeq mRNATruSeq mRNA
Repeat_Library_Suffix
Lib_StatusSendToSequenceSendToSequence
ProjectENCORE2ENCORE2
ID47204721




Sequencing Information
BGHcLV47-11BGHcLV47-12
Sample_IDBGHcLV47-11BGHcLV47-12
Sample NameDENR-BGHcLV47-11DENR-BGHcLV47-12
Pool IDPool-250422Pool-250422
LocalServer_folder
total_reads00
total_aligned_reads00
unique_aligned_reads00
percent_uniqueAligned
correlation_replicates
spikein_reads00
percent_spikeins
original_ReadLength
QC_StatusReadyToQCReadyToQC
ID34233424




Data Submission Information
DCC submission information was not avaliable




File Information
Files of the experiment was not avaliable in the database