ZNF12

General Information

Gene Name : ZNF12
Gene ID : ENSG00000164631.18
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ZNF12)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ZNF12	ENSG00000164631.18	11.45	12.13	11.79	ENCSR000AEF
HepG2	ZNF12	ENSG00000164631.18	10.97	14.93	12.95	ENCSR985KAT
K562	ZNF12	ENSG00000164631.18	10.60	9.30	9.95	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ZNF12 is not avaliable on ENCORE database.

Proteins bound to RNA

ZNF12 RNA is bound by 31 proteins.

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eCLIP assay for ZNF12 is not avaliable on ENCORE database.

31 proteins are bound to ZNF12 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr7	6735883	6735950	-	intron-Distal	6.63249	80.81919	HepG2	QKI
chr7	6741819	6741991	-	intron-Distal	6.99893	80.16996	K562	EIF4G2
chr7	6735905	6736004	-	intron-Distal	8.33073	69.20196	K562	QKI
chr7	6742077	6742140	-	intron-Distal	6.56706	35.06575	K562	EIF4G2
chr7	6735950	6735973	-	intron-Distal	5.86173	28.59258	HepG2	QKI
chr7	6741956	6742073	-	intron-Distal	6.45631	22.45479	K562	TARDBP
chr7	6742087	6742141	-	intron-Distal	6.02594	21.72558	HepG2	DKC1
chr7	6741771	6741903	-	intron-Distal	4.62798	18.68971	HepG2	DKC1
chr7	6742033	6742077	-	intron-Distal	5.91003	17.75857	K562	EIF4G2
chr7	6741878	6741956	-	intron-Distal	6.09147	17.00651	K562	TARDBP
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 74 entries

eCLIP assay for ZNF12 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ZNF12 is not available on ENCORE database.
74 RBPs can affect the levels of ZNF12.

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The Knockdown/knockout RNA-Seq assay for ZNF12 is not available on ENCORE database.

74 RBPs can affect the gene expression of ZNF12 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ZNF12	ENSG00000164631.14	3645.95500	1967.61400	0.88970	13.99990	12.82400	K562	AQR
ZNF12	ENSG00000164631.14	767.71470	1261.53750	-0.71650	13.10340	11.88450	K562	FXR1
ZNF12	ENSG00000164631.14	980.78370	1450.00780	-0.56410	11.67060	10.54310	HepG2	SUCLG1
ZNF12	ENSG00000164631.14	1852.78390	1137.57300	0.70360	11.79960	9.94180	K562	WDR3
ZNF12	ENSG00000164631.14	3529.98570	2216.20530	0.67150	11.47950	9.57710	K562	ZC3H8
ZNF12	ENSG00000164631.14	739.55400	1539.54260	-1.05780	10.20210	8.98260	K562	PTBP1
ZNF12	ENSG00000164631.14	849.32970	1255.47930	-0.56380	9.24660	8.49500	HepG2	SRSF1
ZNF12	ENSG00000164631.14	599.47620	906.10320	-0.59600	8.67110	7.63340	HepG2	SMN1
ZNF12	ENSG00000164631.14	808.82280	1404.07450	-0.79570	8.00630	7.15270	HepG2	AKAP1
ZNF12	ENSG00000164631.14	1658.77710	1253.82710	0.40370	8.06290	6.88480	K562	NSUN2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 83 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ZNF12 is not available on ENCORE database.

3 RBPs can affect the splicing of ZNF12 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
A3SS	ZNF12	ENSG00000164631.14	chr7	-	6736969	6737120	6736969	6737065	6737315	6737442	0.14900	0.00000	0.00000	longer	K562	AQR
SE	ZNF12	ENSG00000164631.14	chr7	-	6733287	6733340	6728063	6732334	6736969	6737065	0.08400	0.00005	0.00606	included	HepG2	RBM22
A3SS	ZNF12	ENSG00000164631.14	chr7	-	6732232	6732373	6732232	6732334	6736969	6737120	0.06400	0.00012	0.00105	longer	K562	AQR
SE	ZNF12	ENSG00000164631.14	chr7	-	6744789	6744854	6737315	6737442	6746062	6746554	-0.07400	0.00923	0.09893	excluded	K562	PUS1

Showing 1 to 4 of 4 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ZNF12

General Information

Functions

Localization

Domains (AlphaFold: ZNF12)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ZNF12 is not avaliable on ENCORE database.

31 proteins are bound to ZNF12 RNA:

eCLIP assay for ZNF12 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ZNF12 is not available on ENCORE database.

74 RBPs can affect the gene expression of ZNF12 :

The Knockdown/knockout RNA-Seq assay for ZNF12 is not available on ENCORE database.

3 RBPs can affect the splicing of ZNF12 :

The Knockdown/knockout RNA-Seq assay for ZNF12 is not avaliable on ENCORE database.