SUPT16H

General Information

Gene Name : SUPT16H
Gene ID : ENSG00000092201.9
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: SUPT16H)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	SUPT16H	ENSG00000092201.9	146.90	136.85	141.88	ENCSR000AEF
HepG2	SUPT16H	ENSG00000092201.9	158.85	216.78	187.81	ENCSR985KAT
K562	SUPT16H	ENSG00000092201.9	96.49	102.03	99.26	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for SUPT16H is not avaliable on ENCORE database.

Proteins bound to RNA

SUPT16H RNA is bound by 37 proteins.

CanvasJS.com

eCLIP assay for SUPT16H is not avaliable on ENCORE database.

37 proteins are bound to SUPT16H RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr14	21830982	21831086	-	CDS,intron-Distal	4.72282	28.49553	HepG2	BCLAF1
chr14	21821645	21821722	-	CDS,intron-Distal,intron-Proximal	5.30777	25.79409	K562	UCHL5
chr14	21820854	21820947	-	CDS,intron-Distal	5.31878	24.68785	K562	UCHL5
chr14	21820895	21820959	-	CDS,intron-Distal	5.28247	23.70298	HepG2	BCLAF1
chr14	21820810	21820978	-	3'-UTR,CDS,intron-Distal	3.65097	23.65817	K562	ZNF800
chr14	21833014	21833092	-	CDS,intron-Distal	4.81458	22.23475	HepG2	BCLAF1
chr14	21820947	21820977	-	CDS,intron-Distal	5.44825	21.65749	K562	UCHL5
chr14	21852067	21852177	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.78042	19.13251	HepG2	NCBP2
chr14	21831192	21831311	-	CDS,intron-Distal,intron-Proximal	4.85079	18.54608	HepG2	FXR2
chr14	21829056	21829114	-	CDS,intron-Distal	4.31361	17.50486	HepG2	BCLAF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 207 entries

eCLIP assay for SUPT16H is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for SUPT16H is not available on ENCORE database.
127 RBPs can affect the levels of SUPT16H.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for SUPT16H is not available on ENCORE database.

127 RBPs can affect the gene expression of SUPT16H :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
SUPT16H	ENSG00000092201.5	1753.55960	6130.81060	-1.80580	124.60630	121.28490	HepG2	DNAJC21
SUPT16H	ENSG00000092201.5	12574.56290	6832.85150	0.87980	55.93440	54.41470	HepG2	SRSF1
SUPT16H	ENSG00000092201.5	4946.23730	8557.10410	-0.79080	54.85890	53.22520	HepG2	ZNF622
SUPT16H	ENSG00000092201.5	4867.14390	9600.24060	-0.98000	54.89950	52.67580	HepG2	SRSF7
SUPT16H	ENSG00000092201.5	4004.69530	6911.85330	-0.78740	46.85560	44.91540	HepG2	CKAP4
SUPT16H	ENSG00000092201.5	2993.31400	6645.34020	-1.15060	45.09850	43.53020	HepG2	TIAL1
SUPT16H	ENSG00000092201.5	4098.38670	10135.16180	-1.30620	36.30770	34.43450	HepG2	HNRNPLL
SUPT16H	ENSG00000092201.5	3841.24750	6076.91630	-0.66180	32.79720	30.78980	HepG2	DNAJC2
SUPT16H	ENSG00000092201.5	2379.41930	6429.81570	-1.43420	31.28720	29.54310	HepG2	DDX6
SUPT16H	ENSG00000092201.5	4618.91770	9879.36490	-1.09690	29.35070	27.47290	HepG2	TARDBP
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 163 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for SUPT16H is not available on ENCORE database.

4 RBPs can affect the splicing of SUPT16H :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
A3SS	SUPT16H	ENSG00000092201.5	chr14	-	21830952	21831139	21830952	21831106	21831192	21831308	0.07100	0.00000	0.00000	longer	HepG2	RBM22
A3SS	SUPT16H	ENSG00000092201.5	chr14	-	21825355	21825539	21825355	21825525	21826085	21826184	0.05800	0.00000	0.00001	longer	K562	AQR
A3SS	SUPT16H	ENSG00000092201.5	chr14	-	21832937	21833129	21832937	21833098	21833228	21833302	0.07400	0.00000	0.00000	longer	K562	AQR
A3SS	SUPT16H	ENSG00000092201.5	chr14	-	21829236	21829445	21829236	21829372	21830355	21830483	0.06600	0.00000	0.00000	longer	K562	AQR
A3SS	SUPT16H	ENSG00000092201.5	chr14	-	21837908	21838079	21837908	21838055	21838494	21838647	0.06000	0.00000	0.00000	longer	K562	AQR
A3SS	SUPT16H	ENSG00000092201.5	chr14	-	21821861	21822109	21821861	21821991	21822569	21822735	0.08800	0.00000	0.00000	longer	K562	AQR
A3SS	SUPT16H	ENSG00000092201.5	chr14	-	21837367	21837578	21837367	21837514	21837908	21838055	0.05400	0.00000	0.00000	longer	K562	AQR
A3SS	SUPT16H	ENSG00000092201.5	chr14	-	21830355	21830524	21830355	21830483	21830952	21831106	0.06200	0.00000	0.00000	longer	K562	AQR
A3SS	SUPT16H	ENSG00000092201.5	chr14	-	21826085	21826211	21826085	21826161	21826473	21826687	0.05300	0.00001	0.00012	longer	K562	AQR
A3SS	SUPT16H	ENSG00000092201.5	chr14	-	21840032	21840203	21840032	21840129	21841496	21841589	-0.05800	0.00001	0.00101	shorter	HepG2	U2AF1

Showing 1 to 10 of 13 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

SUPT16H

General Information

Functions

Localization

Domains (AlphaFold: SUPT16H)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for SUPT16H is not avaliable on ENCORE database.

37 proteins are bound to SUPT16H RNA:

eCLIP assay for SUPT16H is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for SUPT16H is not available on ENCORE database.

127 RBPs can affect the gene expression of SUPT16H :

The Knockdown/knockout RNA-Seq assay for SUPT16H is not available on ENCORE database.

4 RBPs can affect the splicing of SUPT16H :

The Knockdown/knockout RNA-Seq assay for SUPT16H is not avaliable on ENCORE database.