SLC25A6

General Information

Gene Name : SLC25A6
Gene ID : ENSG00000169100.13
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: SLC25A6)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	SLC25A6	ENSG00000169100.13	21.62	127.01	74.31	ENCSR000AEF
HepG2	SLC25A6	ENSG00000169100.13	446.41	71.05	258.73	ENCSR985KAT
K562	SLC25A6	ENSG00000169100.13	199.68	79.10	139.39	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary

RNA Targets

eCLIP assay for SLC25A6 is not avaliable on ENCORE database.

Proteins bound to RNA

NO known proteins bind on SLC25A6 RNA with finished eCLIP experiments on ENCORE database.

eCLIP assay for SLC25A6 is not avaliable on ENCORE database.

NO known proteins are bound to SLC25A6 RNA with finished eCLIP experiments on ENCORE database.

eCLIP assay for SLC25A6 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for SLC25A6 is not available on ENCORE database.
120 RBPs can affect the levels of SLC25A6.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for SLC25A6 is not available on ENCORE database.

120 RBPs can affect the gene expression of SLC25A6 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
SLC25A6	ENSG00000169100.8	3811.00350	12764.78940	-1.74390	199.00760	196.70020	HepG2	SRSF1
SLC25A6	ENSG00000169100.8	2829.46010	11474.15820	-2.01980	166.72770	163.25440	HepG2	TAF15
SLC25A6	ENSG00000169100.8	11319.13860	5004.97890	1.17720	115.37560	112.50160	HepG2	SLBP
SLC25A6	ENSG00000169100.8	8790.56460	3380.69990	1.37850	106.65440	103.82590	HepG2	TRIM56
SLC25A6	ENSG00000169100.8	4933.29800	11746.57890	-1.25160	90.35820	88.32690	HepG2	PTBP1
SLC25A6	ENSG00000169100.8	10678.55790	5540.93370	0.94640	81.34000	79.08570	HepG2	PUM1
SLC25A6	ENSG00000169100.8	4760.34100	9197.19460	-0.95010	63.33660	60.58770	K562	WDR43
SLC25A6	ENSG00000169100.8	8771.70180	3070.81590	1.51410	62.89620	60.53130	HepG2	SAFB2
SLC25A6	ENSG00000169100.8	1721.40290	8248.15340	-2.26050	48.71730	45.57150	HepG2	SNRNP70
SLC25A6	ENSG00000169100.8	10382.23440	5022.87710	1.04740	44.61100	42.31440	HepG2	HNRNPL
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 136 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for SLC25A6 is not available on ENCORE database.

8 RBPs can affect the splicing of SLC25A6 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	SLC25A6	ENSG00000169100.8	chrX	-	1509084	1509183			1508133	1508620	1510791	1510996	-0.05700	0.00000	0.00011	excluded	HepG2	LARP7
SE	SLC25A6	ENSG00000169100.8	chrX	-	1509084	1509183			1508133	1508620	1510791	1510996	0.05600	0.00000	0.00000	included	K562	AQR
SE	SLC25A6	ENSG00000169100.8	chrX	-	1509084	1509183			1508133	1508620	1510791	1510996	-0.06800	0.00000	0.00000	excluded	HepG2	XPO5
SE	SLC25A6	ENSG00000169100.8	chrX	-	1509084	1509183			1508133	1508620	1510791	1510996	-0.05200	0.00000	0.00950	excluded	HepG2	NIP7
SE	SLC25A6	ENSG00000169100.8	chrX	-	1509084	1509183			1508133	1508620	1510791	1510996	0.06700	0.00000	0.00000	included	K562	HNRNPC
MXE	SLC25A6	ENSG00000169100.8	chrX	-	1506171	1506312	1508133	1508620	1505044	1505652	1510791	1511617	0.14300	0.00005	0.02670	1included	HepG2	TRA2A
SE	SLC25A6	ENSG00000169100.8	chrX	-	1509084	1509183			1508133	1508620	1510791	1510996	-0.05100	0.00012	0.05361	excluded	K562	XRN2
SE	SLC25A6	ENSG00000169100.8	chrX	-	1509084	1509183			1508133	1508620	1510791	1510996	0.41200	0.00740	0.09771	included	K562	U2AF2

Showing 1 to 8 of 8 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

SLC25A6

General Information

Functions

Localization

Domains (AlphaFold: SLC25A6)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for SLC25A6 is not avaliable on ENCORE database.

NO known proteins are bound to SLC25A6 RNA with finished eCLIP experiments on ENCORE database.

eCLIP assay for SLC25A6 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for SLC25A6 is not available on ENCORE database.

120 RBPs can affect the gene expression of SLC25A6 :

The Knockdown/knockout RNA-Seq assay for SLC25A6 is not available on ENCORE database.

8 RBPs can affect the splicing of SLC25A6 :

The Knockdown/knockout RNA-Seq assay for SLC25A6 is not avaliable on ENCORE database.