RP11-499F3.2

General Information

Gene Name       : RP11-499F3.2
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RP11-499F3.2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RP11-499F3.2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • RP11-499F3.2 RNA is bound by 12 proteins.  







eCLIP assay for RP11-499F3.2 is not avaliable on ENCORE database.





12 proteins are bound to RP11-499F3.2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr158207424782074332-intron-Distal3.748553.98203K562MATR3
chr158211547582115539-intron-Distal3.348554.02190K562EXOSC5
chr158211410882114157-intron-Distal5.269508.36716K562EXOSC5
chr158200791082008026-intron-Distal3.807943.60701K562KHDRBS1
chr158207423382074310-intron-Distal3.893084.67922K562PTBP1
chr158208672382086797-intron-Distal4.986024.30178K562PTBP1
chr158215272682152833-intron-Distal4.876615.44904K562TARDBP
chr158208544182085578-intron-Distal6.9061122.91239K562PTBP1
chr158207571982075770-intron-Distal5.233947.09667K562LIN28B
chr158197810081978184-intron-Distal5.540708.93487K562PTBP1
chr158215971582159803-intron-Distal5.4985322.63563K562PTBP1
chr158207957382079678-intron-Distal4.361103.06015K562MATR3
chr158203589382035982-intron-Distal3.860693.37923K562KHDRBS1
chr158208683582086905-intron-Distal3.843323.97268K562PTBP1
chr158207956582079655-intron-Distal5.5522419.63041K562PTBP1
chr158211392882113973-intron-Distal4.175956.71225K562EXOSC5
chr158207581282075899-intron-Distal3.197755.15138K562ILF3
chr158208111382081215-intron-Distal5.4720117.88087K562PTBP1
chr158215965682159715-intron-Distal6.4929236.31061K562PTBP1
chr158211397382114016-intron-Distal4.625058.51196K562EXOSC5
chr158211387082113902-intron-Distal3.903793.01456K562EXOSC5
chr158197222281972262-intron-Distal3.957253.01456K562EXOSC5
chr158212383482123905-intron-Distal3.696753.29026K562KHDRBS1
chr158203472882034812-intron-Distal4.044974.07352K562KHSRP
chr158204826882048400-intron-Distal3.531484.73075K562MATR3
chr158207591182075983-intron-Distal4.544224.07991K562ILF3
chr158215720882157267-intron-Distal4.317584.04407K562HNRNPL
chr158207452982074623-intron-Distal4.448715.27102K562HNRNPK
chr158200142582001517-intron-Distal5.004284.40618K562PTBP1
chr158208335982083487-intron-Distal3.820925.62303K562QKI
chr158208543682085568-intron-Distal3.665566.48437K562MATR3
chr158207571282075804-intron-Distal4.568825.31905K562ILF3
chr158204403182044085-intron-Distal3.359903.72797K562GTF2F1
chr158212109482121225-intron-Distal3.346684.83972K562KHDRBS1
chr158197337281973425-intron-Distal3.410703.43829K562EXOSC5
chr158212261782122706-intron-Distal4.221093.87294K562TARDBP
chr158208497382085092-intron-Distal3.824833.80954K562HNRNPL
chr158195554881955637-intron-Distal4.179535.03657K562PTBP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RP11-499F3.2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RP11-499F3.2 is not available on ENCORE database.

  • No RBPs affect the gene expression of RP11-499F3.2 on ENCORE database.


The Knockdown/knockout RNA-Seq assay for RP11-499F3.2 is not available on ENCORE database.






No RBPs affect the gene expression of RP11-499F3.2 on ENCORE database.






The Knockdown/knockout RNA-Seq assay for RP11-499F3.2 is not available on ENCORE database.






No RBPs affect the alternative splcing events of RP11-499F3.2 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for RP11-499F3.2 is not avaliable on ENCORE database.