CTD-2015H3.2

General Information

Gene Name       : CTD-2015H3.2
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CTD-2015H3.2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CTD-2015H3.2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CTD-2015H3.2 RNA is bound by 6 proteins.  







eCLIP assay for CTD-2015H3.2 is not avaliable on ENCORE database.





6 proteins are bound to CTD-2015H3.2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1816979281698001+intron-Distal4.612909.03914K562PTBP1
chr1816985271698630+intron-Distal4.886407.00634K562KHSRP
chr1816994511699541+intron-Distal3.605964.56724K562KHSRP
chr1816729861673137+intron-Distal4.077104.27660K562HNRNPL
chr1816918651691878+intron-Distal5.373917.54178K562WRN
chr1816986301698662+intron-Distal3.793723.26999K562KHSRP
chr1816987741698843+intron-Distal4.363005.62258K562KHSRP
chr1816918561691881+intron-Distal5.871426.49327K562GEMIN5
chr1817328411732932+intron-Distal3.754323.30744K562PTBP1
chr1816918561691880+intron-Distal5.772435.05269K562DHX30
chr1816918551691865+intron-Distal5.373917.54178K562WRN
chr1816983001698362+intron-Distal3.466613.51696K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CTD-2015H3.2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CTD-2015H3.2 is not available on ENCORE database.

  • No RBPs affect the gene expression of CTD-2015H3.2 on ENCORE database.


The Knockdown/knockout RNA-Seq assay for CTD-2015H3.2 is not available on ENCORE database.






No RBPs affect the gene expression of CTD-2015H3.2 on ENCORE database.






The Knockdown/knockout RNA-Seq assay for CTD-2015H3.2 is not available on ENCORE database.






No RBPs affect the alternative splcing events of CTD-2015H3.2 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for CTD-2015H3.2 is not avaliable on ENCORE database.